2020

PD-1 pathway regulates ILC2 metabolism and PD-1 agonist treatment ameliorates airway hyperreactivity
Helou DG, Shafiei-Jahani P, Lo R, Howard E, Hurrell BP, Galle-Treger L, Painter JD, Lewis G, Soroosh P, Sharpe AH, and Akbari O. Nat Commun (2020) Link

Metabolomic profiles in the brains of juvenile steelhead (Oncorhynchus mykiss) following bifenthrin treatment
Magnuson JT, Cryder Z, Andrzejczyk NE, Harraka G, Wolf DC, Gan J, and Schlenk D. Environ Sci Technol (2020) Link

Interpersonal gut microbiome variation drives susceptibility and resistance to cholera infection
Alavi S, Mitchell JD, Cho JY, Liu R, Macbeth JC, and Hsiao A. Cell (2020) Link

Two-dimensional identification and localization of isomers in crystallin peptides using TWIM-MS
Wu HT and Julian RR. Analyst (2020) Link

Human ARMT1 structure and substrate specificity indicates that it is a DUF89 family damage-control phosphatase
Dennis TN, Kenjic N, Kang AS, Lowenson JD, Kirkwood JS, Clarke SG, and Perry J. J Struct Biol (2020) Link

Conserved metabolite regulation of stress granule assembly via AdoMet
Begovich K, Vu AQ, Yeo G, and Wilhelm JE. J Cell Biol (2020) Link

The use of non-targeted metabolomics to assess the toxicity of bifenthrin to juvenile Chinook salmon (Oncorhynchus tshawytscha)
Magnuson JT, Giroux M, Gryder Z, Gan J, and Schlenk D. Aquat Toxicol (2020) Link

Characterizing woody breast myopathy in a meat broiler line by heat production, microbiota, and plasma metabolites
Maharjan P, Hilton K, Weil J, Suesuttajit N, Beitia A, Owens CM, and Coon C. Front. Vet. Sci. (2020) Link

Symbiont population control by host-symbiont metabolic interaction in Symbiodiniaceae-cnidarian associations
Xiang T, Lehnrt E, Jinkerson RE, Clowez S, Kim RG, DeNofrio JC, Pringle JR, and Grossman AR. Nat Commun (2020) Link

2019

Absorptive transport of amino acids by the rat colon
Chen Y, Dinges MM, Green A, Cramer SE, Larive CK, and Lytle C. Am J Physiol (2019) Link

Cadmium and selenate exposure affects the honey bee microbiome and metabolome, and bee-associated bacteria show potential for bioaccumulation
Rothman JA, Leger L, Kirkwood JS, and McFrederick QS. Appl Environ Microbiol (2019) Link

Metabolite biomarkers of chlorothalonil exposure in earthworms, coelomic fluid, and coelomocytes
Griffith CM, Thai AC, and Larive CK. Sci Total Environ (2019) Link

Maternal-to-zygotic transitions as a potential target for niclosamide during early embryogenesis
Vliet SMF, Dasgupta S, Sparks NRL, Kirkwood JS, Vollaro A, Hur M, Zur Nieden NI, and Volz DC. Toxicol Appl Pharmacol (2019) Link

Complex interplay among nuclear receptor ligands, cytosine methylation, and the metabolome in driving tris(1,3-dichloro-2-propyl)phosphate-induced epiboly defects in zebrafish
Dasgupta S, Vliet SMF, Cheng V, Mitchell CA, Kirkwood JS, Vollaro A, Hur M, and Volz DC. Environ Sci Technol (2019) Link

mRNA-sequencing identifies liver as a potential target organ for triphenyl phosphate in embryonic zebrafish
Reddam A, Mitchell CA, Dasgupta S, Kirkwood JS, Vollaro A, Hur M, and Volz DC. Toxicol Sci (2019) Link

Synthesis  and structure reassignment of malylglutamate, a recently discovered earthworm metabolite
Griffith CM, Feceu A, Larive CK, and Martin DBC. J Nat Prod (2019) Link

Useful Links/Resources

  1. Metabolomics Society
  2. American Society for Mass Spectrometry
  3. Metabolomics Databases/Libraries:
  4. Open Source Data Analysis Software: